PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc020873.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 211aa    MW: 23545 Da    PI: 6.9853
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc020873.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.31.4e-0982104326
                            S---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                            t++C++f++ G+Ck+G++CkF+Hg
  Cse_sc020873.1_g030.1  82 TKICHYFSK-GHCKHGSSCKFSHG 104
                            789******.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MPQRYSVVGR SGGEGSGVAE WEEVTPNGIM WSLRIQLADN KIVFGYSVTK PLLLCTIETV  60
IRDCYSPNEH FSVRGRRYDN PTKICHYFSK GHCKHGSSCK FSHGSDYGFK HMALGVAGLG  120
CEDALIHLLN YLWPNIFETS PHVLNVVMEA IEGMRVALGA AVVLNYCLQG LFHPARKVRE  180
VYWKIYNSLY IGAQDALVAA YPVLEDEGDN V