PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc020886.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 264aa    MW: 30439.2 Da    PI: 8.3231
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc020886.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.52e-151057148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+ Ed +l+ +v+++G ++W+ Ia+  g++Rt+k+c++rw +yl
  Cse_sc020886.1_g020.1 10 KGPWTEHEDFQLLFYVHMFGDRRWDFIANVSGLKRTGKSCRLRWVNYL 57
                           79********************************************97 PP
2Myb_DNA-binding51.52.3e-1663107147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            rg+ T+ E+ l ++++ ++G++ W++Iar+++ gRt++++k++w+++
  Cse_sc020886.1_g020.1  63 RGKLTAHEERLVLELHSKFGNR-WSKIARRLP-GRTDNEIKNYWRTH 107
                            7999******************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MGQEDEMMRK GPWTEHEDFQ LLFYVHMFGD RRWDFIANVS GLKRTGKSCR LRWVNYLNPD  60
LKRGKLTAHE ERLVLELHSK FGNRWSKIAR RLPGRTDNEI KNYWRTHTRK EAQEKKRQSS  120
GSPSPSLSHC SSCSSVCNSH PIMGSLPLID KKERNFYDTG GVEMLTVIKG KNSSKKKNSE  180
KATSKVSNFK EGQEGHYSMD EIWKDIDLLD EDTIKPVFDP YSEIAPSLTW DNSLITSWTM  240
GSQEEFSIDS FPLTSQQFSS GLTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.19e-74MYB family protein