PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020992.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 385aa MW: 44880.1 Da PI: 5.0734

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020992.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.3	1.4e-34	71	163	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Flkk++e+++d++++e+iswse+++sfv++d+++f++++Lp+ Fkh+nf+SFvRQLn+Y Fkk++ ++ weF+++ F+kg Cse_sc020992.1_g030.1 71 FLKKTFEMVDDPKTDEIISWSETQKSFVLWDPHKFSTDLLPQRFKHNNFSSFVRQLNTYRFKKIDPDR---------WEFANELFQKG 149 9**************************************************************999.........******* PP XXXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkkse 103 kk+ll++ikr++++ Cse_sc020992.1_g030.1 150 KKHLLRHIKRRTTQ 163 *********876 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MQVVKEPIYD ENQDFLEIKE EPLVVVLDKD GDEIMKVKEE PILVYDDDQE GFLDGLPKPI 60 EGLRDGGPPP FLKKTFEMVD DPKTDEIISW SETQKSFVLW DPHKFSTDLL PQRFKHNNFS 120 SFVRQLNTYR FKKIDPDRWE FANELFQKGK KHLLRHIKRR TTQSQIMQKQ TIAEQQQSCP 180 QQTDSTIESE LEILRKDRTA LRQEILKMKQ QQESMDKHLE VVQERMLRME FKQQKMLLFM 240 SKAFRNRAFS NLLQHLVQKK EMGSVEMCKR RKVEQMLSAV NADELSCAQE VWNMIEADAC 300 TAFTSEESVS PPEDQKISDK SGVSNSDNNS ESFILNLSSR MGRTNPKSLA SDSFIWYDIC 360 PLADDQLLQP YIKSPYLMAF ELGSG

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MQVVKEPIYD ENQDFLEIKE EPLVVVLDKD GDEIMKVKEE PILVYDDDQE GFLDGLPKPI  60
EGLRDGGPPP FLKKTFEMVD DPKTDEIISW SETQKSFVLW DPHKFSTDLL PQRFKHNNFS  120
SFVRQLNTYR FKKIDPDRWE FANELFQKGK KHLLRHIKRR TTQSQIMQKQ TIAEQQQSCP  180
QQTDSTIESE LEILRKDRTA LRQEILKMKQ QQESMDKHLE VVQERMLRME FKQQKMLLFM  240
SKAFRNRAFS NLLQHLVQKK EMGSVEMCKR RKVEQMLSAV NADELSCAQE VWNMIEADAC  300
TAFTSEESVS PPEDQKISDK SGVSNSDNNS ESFILNLSSR MGRTNPKSLA SDSFIWYDIC  360
PLADDQLLQP YIKSPYLMAF ELGSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	4e-68	HSF family protein