PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021003.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 200aa MW: 22383.5 Da PI: 5.5588

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021003.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	53.6	4.4e-17	70	106	23	59
EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 sYY+Cts gC+v+k+ver+++d + v++tYeg+Hnh+ Cse_sc021003.1_g020.1 70 SYYKCTSLGCSVRKHVERASQDMRSVITTYEGKHNHD 106 9***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MSSQILSNHE VNDYPDQSYC SQGSGPFNSV ATPENSLISV GDDEFDRSRS RSAGDDLDAD 60 EDEPQIKRWS YYKCTSLGCS VRKHVERASQ DMRSVITTYE GKHNHDVPMA RGSGHRLATA 120 TVGNNVPTMA IKPMAISHYQ ANNSMVDPIR GSRFAPSSDN QSPFTLEMLQ SPGSFKFSRF 180 ENALKSNYID QQHDSEREFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	6e-27	WRKY family protein