PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021041.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family M-type_MADS
Protein Properties Length: 226aa    MW: 25584.2 Da    PI: 7.1364
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021041.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF31.81.8e-101251342
                           --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
                 SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                           ie +  r+ t+ kR++g++ K   + +LC++e++ ii ++
  Cse_sc021041.1_g020.1 12 IEKDAARKATYNKRKKGLMTKLDQITTLCGVEACAIINGP 51
                           89999********************************886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MPKRKGKNNQ YIEKDAARKA TYNKRKKGLM TKLDQITTLC GVEACAIING PYKPGFEVWP  60
NDEGVLSVLN KFSSMSEMDR SKHKENKPRY LENRIKKLEE QIKKQMMLNR GLEIDNLMSD  120
CLSGKVSVAD DLNIPNKQAI SSLADQILLE IDERLELLIK NGTPADAPPP PPPPPQLPND  180
VECYVPVMEN QGASTESETS WYPTDWLGNY NWNLMQWDRA SSSKTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65330.14e-30M-type_MADS family protein