PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021057.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

SBP

Protein Properties

Length: 302aa MW: 34580.7 Da PI: 8.4058

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021057.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131	4.1e-41	194	271	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adl++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+++ Cse_sc021057.1_g010.1 194 RCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKSSQ 271 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MTPFPTHFSN KETTTMLDYE WGNPSTMILN GAVTVDDHHH TTTQPPSNHH TSRHFFDHYS 60 NDQTFEHNNN TNTNNLNNNN TPYLSTNDHH FLNNQQNNPY LNNTNNQTHF PSLYDPRAYT 120 SACTYAPTLE NPDQGYMIMP KVEPSNGCAI DFTNNRIGLN LGGRTYFSSA EDDFVNRLYR 180 RSRPLDAALV SSPRCQAEGC NADLTHAKHY HRRHKVCEFH SKASTVITAG LTQRFCQQCS 240 RFHLLSEFDN GKRSCRKRLA DHNRRRRKSS QNQDQSKSLV TVSSTQSSSS DIISRYQSDS 300 RA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	8e-76	SBP family protein