PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021115.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 919aa MW: 100537 Da PI: 8.7118

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021115.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8e-05	776	798	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg +F+ ++ ++rHi H Cse_sc021115.1_g020.1 776 HQCHICGLRFKLQERFNRHIEWH 798 79******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 919 aa Download sequence
MEMDRSLRNP ASLKKPRLLT DETMSFLRAN NNSDSERYEP QAISQLQQDK ELVNQYRTAL 60 SELTFNSKPI ITNLTIIAGE NLHAAKGVAA TICDNIIEVP SDQKLPSLYL LDSIVKNIGR 120 DYIKYFAARL PEVFCKAYRQ VDPAVHSGMR HLFGTWKGVF PSQSLQAIEK QLGFQSPSNG 180 SSLGSTAARF EPEPQRPAGS IHVNPKYLEA RPRLQQSNTA KAPTSDTNLL NTPEDTERQD 240 RIAANISSIR PRADPRIKNI QQIQREVEGA SIHDNDSAPY NDCDYGSDAG FRKSSATVGE 300 QGFNNSWYGS GNHSTEPISG QRNGFDMKHG ILSVPRSANA DVKLQPTNNI ARKRGSEVNG 360 SWKNSEEEEY TWDGMNSRVA NPGKSNSSSK RDPRSQPKLE KMGFQKLQGI KDTIPLSTDQ 420 NNGGVFRQQS SLGTRSSSTS FNGVATSVNS LSKTSLESPI RSSHVDVPGL MFTPSVVRGQ 480 QRHTNGVASP PGQAPPLQRP PAPSFPTYNA SKIMHDIAAQ DGPDSKPAQS RGQKGISSIK 540 GIPQILRMGN SQKPQIRNSH SVKHEPFQSP TTKMSVDANQ LVGSSMDQLK SSTADIPGPS 600 TPGNMLGAVS SIFGKKSNPR PLLPSGPPPT QFTSLGSHMS PSSHDSILLS ASTLQREADK 660 ALVPPVSSIL STLVAKGLIS ASKADSSSDQ TPTRSSSPKT DPPASLAVPA VIPKKTKTPL 720 TNDEPSISSS NVKRTVTVPQ LTQEDITSVI GFEFKPDVIR RSHPAVISEL IDDLPHQCHI 780 CGLRFKLQER FNRHIEWHTL KTPELKTPDK VSRRWFVNSD DWAKEKPELQ SGDLPTGPVE 840 IDGEQMVAAD ENQCVCILCG ELFDDFYYQK MDKWMFRRAV HLSINDGATQ GPIVHAHCIS 900 ENSISDLGLS NDVKREEGE

Sequence ? help Back to Top

Protein Sequence Length: 919 aa Download sequence

MEMDRSLRNP ASLKKPRLLT DETMSFLRAN NNSDSERYEP QAISQLQQDK ELVNQYRTAL  60
SELTFNSKPI ITNLTIIAGE NLHAAKGVAA TICDNIIEVP SDQKLPSLYL LDSIVKNIGR  120
DYIKYFAARL PEVFCKAYRQ VDPAVHSGMR HLFGTWKGVF PSQSLQAIEK QLGFQSPSNG  180
SSLGSTAARF EPEPQRPAGS IHVNPKYLEA RPRLQQSNTA KAPTSDTNLL NTPEDTERQD  240
RIAANISSIR PRADPRIKNI QQIQREVEGA SIHDNDSAPY NDCDYGSDAG FRKSSATVGE  300
QGFNNSWYGS GNHSTEPISG QRNGFDMKHG ILSVPRSANA DVKLQPTNNI ARKRGSEVNG  360
SWKNSEEEEY TWDGMNSRVA NPGKSNSSSK RDPRSQPKLE KMGFQKLQGI KDTIPLSTDQ  420
NNGGVFRQQS SLGTRSSSTS FNGVATSVNS LSKTSLESPI RSSHVDVPGL MFTPSVVRGQ  480
QRHTNGVASP PGQAPPLQRP PAPSFPTYNA SKIMHDIAAQ DGPDSKPAQS RGQKGISSIK  540
GIPQILRMGN SQKPQIRNSH SVKHEPFQSP TTKMSVDANQ LVGSSMDQLK SSTADIPGPS  600
TPGNMLGAVS SIFGKKSNPR PLLPSGPPPT QFTSLGSHMS PSSHDSILLS ASTLQREADK  660
ALVPPVSSIL STLVAKGLIS ASKADSSSDQ TPTRSSSPKT DPPASLAVPA VIPKKTKTPL  720
TNDEPSISSS NVKRTVTVPQ LTQEDITSVI GFEFKPDVIR RSHPAVISEL IDDLPHQCHI  780
CGLRFKLQER FNRHIEWHTL KTPELKTPDK VSRRWFVNSD DWAKEKPELQ SGDLPTGPVE  840
IDGEQMVAAD ENQCVCILCG ELFDDFYYQK MDKWMFRRAV HLSINDGATQ GPIVHAHCIS  900
ENSISDLGLS NDVKREEGE