PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021173.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 237aa MW: 26270.5 Da PI: 6.5104

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021173.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.2	4.6e-17	126	218	3	89
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA+++GF vrks +k+ r+g ++++ +vC++eg ++ + + ++k++r+++ + tgCka+++ ++ + k+++t +++ Cse_sc021173.1_g010.1 126 YMKYASKAGFVVRKSCQKRL-RSGIVKQKYLVCNREGCPRGIHIDtldlenSDKQKRSSNLHITGCKARVMFELIPgSTKYKLTIFDS 212 99**********998887.8898********999877777888888899999999***********9******* PP FAR1 84 eHnHel 89 HnHel Cse_sc021173.1_g010.1 213 IHNHEL 218 ***9 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MDSIPNSPVS SDRSSSSQEI GATELSTTES APENVVVSIT ESATEDIVVS DDVSAKYTEE 60 IVAYEHGDES AAIKKLNALK TPESFSTHSN VDTHGGTVYY IPKVPVDVLL AKGNIFNSVD 120 ECSSAYMKYA SKAGFVVRKS CQKRLRSGIV KQKYLVCNRE GCPRGIHIDT LDLENSDKQK 180 RSSNLHITGC KARVMFELIP GSTKYKLTIF DSIHNHELEL KEYKHLSKTE RQLTYVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	7e-08	FAR1 family protein