PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021231.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 202aa MW: 22876.9 Da PI: 9.7464

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021231.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	37.3	8.8e-12	86	140	47	90
FAR1 47 k...........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + ++ +rr+ra++r+gCka l+++++ ++k++v+++ ++HnH+l+ Cse_sc021231.1_g030.1 86 TdtpssdivevvKVIKRRKRASQRCGCKALLRLRQTPENKYVVYTFLEKHNHNLV 140 1456667777777889*************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MSNSFEDDSM QGEPSTPGST NIVQDNVVDA ESVTQVGSYQ PTPPAKNKPM EGTQFDTIEQ 60 ALKFYKEEGV KPLPKNDISK KDKSKTDTPS SDIVEVVKVI KRRKRASQRC GCKALLRLRQ 120 TPENKYVVYT FLEKHNHNLV HENDYKYLQA ARKLTFSKQH LLRQLSNANI GPTRAWKVMK 180 EMYGGFENIG VQHGVGSFYG HI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-09	FAR1 family protein