PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021238.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 227aa    MW: 25129.4 Da    PI: 7.7738
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021238.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.34e-141660146
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                           +g+WT+eEd +l+++v+  G ++W+ I + +  gR++k+c++ w +
  Cse_sc021238.1_g030.1 16 KGSWTPEEDAKLIQLVETQGARNWSVIGSGIS-GRSGKSCRLCWCN 60
                           799*****************************.********99987 PP
2Myb_DNA-binding48.71.7e-1570112347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            ++T+ Ed+ +++a+  +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc021238.1_g030.1  70 PFTPHEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 112
                            89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MTSSSSNDDV NLLKKKGSWT PEEDAKLIQL VETQGARNWS VIGSGISGRS GKSCRLCWCN  60
QLSPNVQHRP FTPHEDDVIL RAHLIHGNKW SVISKLLPGR TDNAIKNHWN STLRRRGLTL  120
TRSSESESTQ SDDDDGLGFK NKRRCVSVSV SVSDVSSCDG MTLLTLLPPG DGEKKKGCDE  180
VEKEIEDMCL VDVMRKMIAK EVRSYIDELR AKDGLSFGAV LPNRASD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.14e-34MYB family protein