PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021263.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 299aa MW: 34296.3 Da PI: 9.7349

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021263.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	44.7	3.5e-14	10	94	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +Wt++ +++Li+ ++ +l+rg+l++++W++v++++ ++ rs +qCk++++ ++k+yk +k +++ s++p+f+++ Cse_sc021263.1_g010.1 10 CWTESATKTLIDSWGDRYLKLNRGNLRQADWKDVANAVnstrdDFTKPPRSDIQCKNRLDTVKKKYKLEKSKNIE------SKWPFFKKM 93 8***********************************996544455589********************8......58***** PP trihelix 86 e 86 + Cse_sc021263.1_g010.1 94 D 94 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MNTRNSRDEC WTESATKTLI DSWGDRYLKL NRGNLRQADW KDVANAVNST RDDFTKPPRS 60 DIQCKNRLDT VKKKYKLEKS KNIESKWPFF KKMDYLLAGG KLMKSKGGLS GEGESVSVVS 120 EKVEFGGNGC SGDEELGNAF VRFAEVYERV ENSKWDAFVK MEKERLEFVK EVEFGRVKML 180 METQLEIEKI RGMMMKKRAV SSVRDSLSPA PSRLKVWFTL YSSSSLTSWF HYFKAAPKLA 240 WFQDVESMLT HHLAELLGLG SLSWAGHQVH VSLPINQFLN AGINPKEIPH SHCKLHFQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	3e-30	Trihelix family protein