PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021312.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 256aa    MW: 27700 Da    PI: 8.2708
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021312.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR147.46.5e-15121249190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......................................te 49 
                            +fY++Y k+ GF+++  ++++ + ++    + f C++ gk++++  +                                       ++
  Cse_sc021312.1_g040.1 121 NFYRHYLKMGGFDIKLGTESNPDGSDFPSIKYFSCNRGGKKRDSMYDrhrsdsdvavrgrvngkgvdgaidnkgkgidlslvgdsfAK 208
                            6********************999999999************9998899************************************999 PP

                   FAR1  50 kerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                            k+ r++++ +tgC a+l+v+k +   +ev+ +++eHnH l+
  Cse_sc021312.1_g040.1 209 KKFRKNTSCKTGCLAQLRVRKVDGVMYEVYVFVEEHNHLLV 249
                            999***********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MTHSDINCID ALIFINCRLG TISSSNNVGE ISSCSYVCGS SSSSGSDGVR VSSSGSVSDD  60
SSSRLVSVSS SSSVVNVSNV VDRSIGVSSD IDGSRVWVPD VDMSLKPTKG TVFVSLVQAY  120
NFYRHYLKMG GFDIKLGTES NPDGSDFPSI KYFSCNRGGK KRDSMYDRHR SDSDVAVRGR  180
VNGKGVDGAI DNKGKGIDLS LVGDSFAKKK FRKNTSCKTG CLAQLRVRKV DGVMYEVYVF  240
VEEHNHLLVS KEDMQF