PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021404.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 264aa    MW: 29811.6 Da    PI: 9.388
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021404.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.35.3e-52141421128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeelvv+yL++kv++++l++ ++i+evd++k++PwdLp      ++e +fFs+r+ ky++g+r+nrat+sgyWkatg 
  Cse_sc021404.1_g020.1  14 LPPGFRFHPTDEELVVQYLRRKVHSSPLPT-SIIPEVDVCKSDPWDLPGD---MDNERFFFSTREVKYPNGNRSNRATQSGYWKATGL 97 
                            79****************************.89***************54...4789******************************* PP

                    NAM  89 dkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk+++s+     ++ +vg+kktLvfykg+ p+g++tdW+mheyrl
  Cse_sc021404.1_g020.1  98 DKQIVSSskinnQQVVVGMKKTLVFYKGKPPSGTRTDWIMHEYRL 142
                            *****99888766666***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MDKVNFVKNG VLRLPPGFRF HPTDEELVVQ YLRRKVHSSP LPTSIIPEVD VCKSDPWDLP  60
GDMDNERFFF STREVKYPNG NRSNRATQSG YWKATGLDKQ IVSSSKINNQ QVVVGMKKTL  120
VFYKGKPPSG TRTDWIMHEY RLASQTPQPK NQGVGNWVLC RIFLKKRGNK KEEEKEYKET  180
IIEVGNVVNN NNNNVEMKPK MKPVFYDFLA KSSLRKEKTG DSNLATAYSS SCSSGVTDAA  240
CGGYGSGEYE HEDETSDHVS KTGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.19e-88NAC family protein