PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021466.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family M-type_MADS
Protein Properties Length: 305aa    MW: 35735.4 Da    PI: 9.4425
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021466.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF29.41.1e-092472762049
                            HHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
                 SRF-TF  20 ilKKAeELSvLCdaevaviifsstgklyey 49 
                            ++KKA+EL++L++a++a+ + s+ ++++ +
  Cse_sc021466.1_g040.1 247 LFKKASELCILTGAQIAIFVKSPADRMHVF 276
                            8*************************9977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MARVPHHSYV GGSPSLATPR HHTMKPRQFR FRRSNDEQED KRKRNLTLPE HEAESSLTRN  60
YIYRDRDVAE ERLMSDYFGD YPKYPEYYFR RRFRISRKLF LEIVQGIENH IQTVNPLPPH  120
FDFFRIRPDT TGMLGSIDCM HWEWKNYPVE WQGQFHRAGA NNDITVLNNS PLFDDLLDDI  180
APKVPFQVNG ATFENRYYLA DGIYPAWSSF VKSFSTAYSD KNALFKQKQE SARKHVEKAF  240
GVLQGRLFKK ASELCILTGA QIAIFVKSPA DRMHVFGHPH ANVLIEKYLQ EKNNDNVSLP  300
KNDFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-10M-type_MADS family protein