PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021645.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 211aa    MW: 24035.5 Da    PI: 7.1098
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021645.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR140.96.6e-1394175287
                   FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 
                            +Y++YA+++GFsvr s++k+  r g + ++ +vC++e ++++++k+     ++++ +   Cka+ +        k+++++++  HnH
  Cse_sc021645.1_g030.1  94 MYRKYASMAGFSVRFSSQKRL-RGGFVRHKYLVCNREEYPKKSDKQ----VKHSNYNIACCKASAVFDIIPgITKFKLITFDVIHNH 175
                            8***************99887.8999***************99988....6666667789*******999999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MALFDFNKPI VSVTDVKNLV VPFTTQATDN LDESIIDSGA LSVDLVVNTS EYVDSGSNAA  60
ENEIIRFYWN MTVPVSLLHV LEIVFDSVED YISMYRKYAS MAGFSVRFSS QKRLRGGFVR  120
HKYLVCNREE YPKKSDKQVK HSNYNIACCK ASAVFDIIPG ITKFKLITFD VIHNHGPHRI  180
EGKCNYQEFG DIISFDATYK TKKYAFEPLI L