PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021674.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 873aa MW: 98535.8 Da PI: 7.8473

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021674.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	37	6.7e-12	603	648	3	48
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 +++++e ++k+ +pi +AAk+Lgv+ ++LKr CR + + WP k Cse_sc021674.1_g010.1 603 DSLTMEAVKKHVGKPIDEAAKSLGVSRSTLKRFCRDNKMTSWPLPK 648 689****************************************765 PP

Sequence ? help Back to Top
Protein Sequence Length: 873 aa Download sequence
MGSCLHLQSF NSSDEGKILD FDSVPDMLSK NISLEKPELL VSGESRYLTR LHVFGNEEEH 60 SQSESAQLII TSGFELGDDN TKKITQHKIL AALKHLTFRE QHVIVQFWSP AHVGKHQVLT 120 TMDQPFGLGA INEQLTSYRK ESQQNFYVVD DDHEEEELSP PARVFKRRLP EWTPDVANYL 180 PKQSPQKESA IRCNLHGYLA LPVVDLFTSS CVGVLEILTS SKYISYAYEI QQIQSTLKVS 240 SLLYFKTMYW VNLKPFIDFN GCQYTANLIT TQAFDGPTIH VHNAHGQNEL EKIHNVLKFV 300 CDTHQLPLAQ TWATSPLTTF ASHDQILKKS CSSFHTRCLG KVCMSTAALP FYVLDLRLWS 360 FRKACKEQHL DQSCSFVGKT LLSHGSCLCE DVTKLSQEEY PLVHYALMSG LSSCFTISLH 420 SIESDNDYVL EFFLPLHRED GSYVQNLVHT LKHSIEIASG FELGDSTEVV GPPMDLSSNI 480 EPDNIQTSSY LIETNPQSTI ISSITTTTTK ILETVSSDSE SIVADVAKTN STHVVNQISP 540 TQDFLNNNGG TIPSTQIVVH DDVIRENDDT TSNRDMVMQV TSETITDAGE RSNRKRGRKR 600 KIDSLTMEAV KKHVGKPIDE AAKSLGVSRS TLKRFCRDNK MTSWPLPKQN KKAARTDSKL 660 SQTSRSKQNL QQSSNVRLSL FGVAILLVRV KRWSCASKRH GFSGNWWSCG KHGHLSFKSD 720 SIYQVARLIV FLQRWKNKKS TRHAMQKRDH LESTEKKLNK LNVDRKLPDS NLFYASPLRI 780 KSHEVSDTRK VTVKATFKDD MIKVQIPISS RLFELQNEVA NRIKLKSAGF RLKYKDEDDD 840 LILLACDADL QNLLGGYSTS NNTTVKLIIQ ADD

Sequence ? help Back to Top

Protein Sequence Length: 873 aa Download sequence

MGSCLHLQSF NSSDEGKILD FDSVPDMLSK NISLEKPELL VSGESRYLTR LHVFGNEEEH  60
SQSESAQLII TSGFELGDDN TKKITQHKIL AALKHLTFRE QHVIVQFWSP AHVGKHQVLT  120
TMDQPFGLGA INEQLTSYRK ESQQNFYVVD DDHEEEELSP PARVFKRRLP EWTPDVANYL  180
PKQSPQKESA IRCNLHGYLA LPVVDLFTSS CVGVLEILTS SKYISYAYEI QQIQSTLKVS  240
SLLYFKTMYW VNLKPFIDFN GCQYTANLIT TQAFDGPTIH VHNAHGQNEL EKIHNVLKFV  300
CDTHQLPLAQ TWATSPLTTF ASHDQILKKS CSSFHTRCLG KVCMSTAALP FYVLDLRLWS  360
FRKACKEQHL DQSCSFVGKT LLSHGSCLCE DVTKLSQEEY PLVHYALMSG LSSCFTISLH  420
SIESDNDYVL EFFLPLHRED GSYVQNLVHT LKHSIEIASG FELGDSTEVV GPPMDLSSNI  480
EPDNIQTSSY LIETNPQSTI ISSITTTTTK ILETVSSDSE SIVADVAKTN STHVVNQISP  540
TQDFLNNNGG TIPSTQIVVH DDVIRENDDT TSNRDMVMQV TSETITDAGE RSNRKRGRKR  600
KIDSLTMEAV KKHVGKPIDE AAKSLGVSRS TLKRFCRDNK MTSWPLPKQN KKAARTDSKL  660
SQTSRSKQNL QQSSNVRLSL FGVAILLVRV KRWSCASKRH GFSGNWWSCG KHGHLSFKSD  720
SIYQVARLIV FLQRWKNKKS TRHAMQKRDH LESTEKKLNK LNVDRKLPDS NLFYASPLRI  780
KSHEVSDTRK VTVKATFKDD MIKVQIPISS RLFELQNEVA NRIKLKSAGF RLKYKDEDDD  840
LILLACDADL QNLLGGYSTS NNTTVKLIIQ ADD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	3e-83	Nin-like family protein