PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021704.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 358aa MW: 41080.9 Da PI: 8.7784

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021704.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	53.2	6.4e-17	113	172	4	54
G2-like 4 lrWtpeLHerFveaveqLGGs.........ekAtPktilelmkvkgLtlehvkSHLQkYR 54 ++Wtp LH++F++av qLG + Pk+il+lm v+gLt+ +v+SHLQk R Cse_sc021704.1_g010.1 113 VEWTPGLHAKFINAVIQLGERsiispdnirTRCYPKNILDLMAVPGLTRMQVASHLQKCR 172 79**************8642222222225789**********************98 PP
2	Myb_DNA-binding	28.5	3.5e-09	114	171	3	47
SS-HHHHHHHHHHHHHTTTT............-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg............tWktIartmg.kgRtlkqcksrwqky 47 WT+ ++ ++++av qlG + +k I m g+t+ q+ s++qk Cse_sc021704.1_g010.1 114 EWTPGLHAKFINAVIQLGERsiispdnirtrcYPKNILDLMAvPGLTRMQVASHLQKC 171 6*******************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MSEQDDDEFI INAIKSGAFL VMKKPLTMEA VSHIRQDVIR DRIRKRENHR SKSRNLKVES 60 QETGMQKNGN LVGKRKDRGE SSKQATSSNY GSNLVFHWSE DDVVRTMKKK TCVEWTPGLH 120 AKFINAVIQL GERSIISPDN IRTRCYPKNI LDLMAVPGLT RMQVASHLQK CRREKWKNDE 180 KRFMRHSLWN YKLSSDFNSK RAAEKKFRCM PSIQINQHDQ DESSKPIGFN FTMNGWHQKE 240 VNHMTNQTER GSVMTRSNQR NIEQRAGYTP FNFQSGYGSK QDEGFGCIFT KTTHDYIQPD 300 DAGQDANHHT FSPDESQASE DFPDFLRDLD GNGPNDNLIA GNIAQDRSCG TPDEVSLI

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MSEQDDDEFI INAIKSGAFL VMKKPLTMEA VSHIRQDVIR DRIRKRENHR SKSRNLKVES  60
QETGMQKNGN LVGKRKDRGE SSKQATSSNY GSNLVFHWSE DDVVRTMKKK TCVEWTPGLH  120
AKFINAVIQL GERSIISPDN IRTRCYPKNI LDLMAVPGLT RMQVASHLQK CRREKWKNDE  180
KRFMRHSLWN YKLSSDFNSK RAAEKKFRCM PSIQINQHDQ DESSKPIGFN FTMNGWHQKE  240
VNHMTNQTER GSVMTRSNQR NIEQRAGYTP FNFQSGYGSK QDEGFGCIFT KTTHDYIQPD  300
DAGQDANHHT FSPDESQASE DFPDFLRDLD GNGPNDNLIA GNIAQDRSCG TPDEVSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	4e-14	ARR-B family protein