PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021757.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 215aa MW: 24235.4 Da PI: 8.503

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021757.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.3	1.3e-16	5	48	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eEd +l+++v+ G ++W+ I + ++ gR++k+c++rw + Cse_sc021757.1_g020.1 5 SWTPEEDAKLIQLVETQGARNWSVIGSSIP-GRSGKSCRLRWCNQ 48 7***************************.*********985 PP
2	Myb_DNA-binding	48.9	1.5e-15	57	99	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed+ +++a+ +G++ W+ I++ ++ gRt++ +k++w++ Cse_sc021757.1_g020.1 57 PFTPHEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 99 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MVERSWTPEE DAKLIQLVET QGARNWSVIG SSIPGRSGKS CRLRWCNQLS PNVQHRPFTP 60 HEDDVILRAH LIHGNKWSVI SKLLPGRTDN AIKNHWNSTL RRRGLTLTRS SESESTQSDD 120 NEGLKNKRRR CVSVSMSDVS SCDGMTVLTL LPPRDEGEKK KAGGDEVEKE IDDTCLVDVM 180 RKMIAKEVRS YIDELRAKDV LSFGAVLRPV AQQSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	2e-43	MYB family protein