PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021757.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 224aa    MW: 24844.9 Da    PI: 7.4275
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021757.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.45.3e-161560147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g+WT+eEd +l+++v+    ++W+ I + ++ gR++k+c++rw + 
  Cse_sc021757.1_g050.1 15 KGSWTPEEDAKLIQLVETQDARNWSVIGSSIP-GRSGKSCRLRWCNQ 60
                           799*****************************.***********985 PP
2Myb_DNA-binding48.81.7e-1569111347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            ++T+ Ed+ +++a+  +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc021757.1_g050.1  69 PFTPHEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 111
                            89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MSSSSNDDVN LLNKKGSWTP EEDAKLIQLV ETQDARNWSV IGSSIPGRSG KSCRLRWCNQ  60
LSPNVQHRPF TPHEDDVILR AHLIHGNKWS VISKLLPGRT DNAIKNHWNS TLRRCGLTLT  120
RSSETESTQS DDDDGLGKNK RRRCVSVSVS DVSSCDGMTL LTLLPPGDGE KKKGGDEVEK  180
EIEDTCLVDV MKKMIAKEVR SYIDELRAKD GLSFGAVLPN RASD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.16e-47MYB family protein