PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021822.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 172aa MW: 19513.9 Da PI: 4.2373

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021822.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	40.9	5.3e-13	54	114	2	62
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkryk 62 W+++e+++Li++r e+e ++ +k++k+lWe v++km+e g+ rs q + +ln+++ Cse_sc021822.1_g020.1 54 WSERETRDLIAIRGELEGDFVVSKRNKGLWEVVGSKMKELGYARSGDQYLDLDLWLNMDFD 114 **********************************************997776666666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MFNTNTGSDM NPNNNETLAH LTQMMMMNIP QEQQPVIISG GLGEVEEYGR VAAWSERETR 60 DLIAIRGELE GDFVVSKRNK GLWEVVGSKM KELGYARSGD QYLDLDLWLN MDFDNEALND 120 NAGEMLMLLE AIRDYHDSTG FYHMVLENFG IPQGHDVFVT KLKDLLHSEN AP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	2e-12	Trihelix family protein