PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021836.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 451aa MW: 52559.6 Da PI: 6.6484

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021836.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	52	2.3e-16	394	441	2	50
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkk 50 p frFhPtdeelv +yLk+kv++k++++ + ik++diyk++PwdLp++ Cse_sc021836.1_g010.1 394 LPDFRFHPTDEELVGFYLKRKVQEKPFSI-DLIKQLDIYKYDPWDLPSE 441 5779***********************.99************943 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
LGKCRKWTAR PETYHFPDHA LLTFETRPVA QRFSWTQPEA DTWPTTYDTT EKEIEETQQT 60 DKDRWKGPAY DISDDQQDIT RGKGMVDSLF QAPQDVGTHF AVMSSYEYIS TGLRTYNLDN 120 NMDGFYIAPA FMDKLVVHIT KNFMTFPNIK EAAKTDMRGV CYLSRIPPRM DPIKLSQTFS 180 QYAELERIYL TPEDPTAHVH RKKAGGFRGQ GITDKSSHSQ STKYQYKAKT TTLKVNGKNR 240 FNIYPREKEV WVLNNKDETK CTVSHVDVGD CDIVEVLENN GDTIKVLSLK RVPCYKSVFR 300 ALEIQTSKEK KVLEIPLADS NRFYCRVPTF LLTVEHDGCL RGSWELDFAK FPVSTNCFMS 360 MYNQWNNISR MGHTPENWER SETNGDQKME EIMLPDFRFH PTDEELVGFY LKRKVQEKPF 420 SIDLIKQLDI YKYDPWDLPS ELHILIFIFL P

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

LGKCRKWTAR PETYHFPDHA LLTFETRPVA QRFSWTQPEA DTWPTTYDTT EKEIEETQQT  60
DKDRWKGPAY DISDDQQDIT RGKGMVDSLF QAPQDVGTHF AVMSSYEYIS TGLRTYNLDN  120
NMDGFYIAPA FMDKLVVHIT KNFMTFPNIK EAAKTDMRGV CYLSRIPPRM DPIKLSQTFS  180
QYAELERIYL TPEDPTAHVH RKKAGGFRGQ GITDKSSHSQ STKYQYKAKT TTLKVNGKNR  240
FNIYPREKEV WVLNNKDETK CTVSHVDVGD CDIVEVLENN GDTIKVLSLK RVPCYKSVFR  300
ALEIQTSKEK KVLEIPLADS NRFYCRVPTF LLTVEHDGCL RGSWELDFAK FPVSTNCFMS  360
MYNQWNNISR MGHTPENWER SETNGDQKME EIMLPDFRFH PTDEELVGFY LKRKVQEKPF  420
SIDLIKQLDI YKYDPWDLPS ELHILIFIFL P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	4e-26	NAC family protein