PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021856.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 386aa MW: 45125.4 Da PI: 8.1711

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021856.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8e-07	71	92	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg sF+ + +Lk+H++ H Cse_sc021856.1_g030.1 71 VCEECGVSFKKPAHLKQHMQGH 92 6******************988 PP
2	zf-C2H2	20	1.9e-06	104	128	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp dC+ s++rk++L+rH+ H Cse_sc021856.1_g030.1 104 FTCPvkDCNLSYRRKDHLTRHLIQH 128 89*******************9877 PP
3	zf-C2H2	12.6	0.0004	135	158	3	23
ET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirt.H 23 Cp +C+ Fs++ +++rH + H Cse_sc021856.1_g030.1 135 CPikKCTSKFSTQGDMERHVQEiH 158 9999***************99877 PP
4	zf-C2H2	19	3.9e-06	170	194	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C Cgk F+ s L++H ++H Cse_sc021856.1_g030.1 170 YVCLepGCGKAFRYASKLQKHENSH 194 899999****************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEEVKMMEET ITKEKRVPKF RDIRRYACEY CGIVRSKKTL INLHIQSNHQ DEIKEKKDDR 60 EEVENGTKKN VCEECGVSFK KPAHLKQHMQ GHSLEVYFEE MRPFTCPVKD CNLSYRRKDH 120 LTRHLIQHER KPLNCPIKKC TSKFSTQGDM ERHVQEIHDK ADDENDENKY VCLEPGCGKA 180 FRYASKLQKH ENSHVQLETV EAFCGEPGCM KFFTNKQCLM AHLQTCHQYI NCEICGSKQL 240 RKNIKRHLHT HEKGVCTERI RCSFEGCKLT FSNVRNLQSI PDSNLRQHVK AAHLQEKPFV 300 CSFSDCGMRF AYKHVRDNHE KTGLHVYTVG DFVEADTEFH SRPRGGTKRK LPAMIENLLK 360 KRVLPPNGSD CHDADYFSWF SGDEEE

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEEVKMMEET ITKEKRVPKF RDIRRYACEY CGIVRSKKTL INLHIQSNHQ DEIKEKKDDR  60
EEVENGTKKN VCEECGVSFK KPAHLKQHMQ GHSLEVYFEE MRPFTCPVKD CNLSYRRKDH  120
LTRHLIQHER KPLNCPIKKC TSKFSTQGDM ERHVQEIHDK ADDENDENKY VCLEPGCGKA  180
FRYASKLQKH ENSHVQLETV EAFCGEPGCM KFFTNKQCLM AHLQTCHQYI NCEICGSKQL  240
RKNIKRHLHT HEKGVCTERI RCSFEGCKLT FSNVRNLQSI PDSNLRQHVK AAHLQEKPFV  300
CSFSDCGMRF AYKHVRDNHE KTGLHVYTVG DFVEADTEFH SRPRGGTKRK LPAMIENLLK  360
KRVLPPNGSD CHDADYFSWF SGDEEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-126	C2H2 family protein