PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021857.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 190aa MW: 22276.2 Da PI: 8.4661

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021857.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.7	1.5e-09	16	50	1	34
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkg 34 rg W++eEde+lv++++ +G + +W+++++ g++ Cse_sc021857.1_g020.1 16 RGLWSPEEDEKLVNYITTYGRHgCWSSVPNLAGLK 50 788***************98******99944 PP
2	Myb_DNA-binding	32.6	1.9e-10	53	93	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ +E l+++++++l ++ W+ Ia++++ gRt+ +k++w+ Cse_sc021857.1_g020.1 53 SFFLQEAALIIELHNMLRNK-WAQIASYLP-GRTDSAVKNFWN 93 55568999**********.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MREGGNRLST RQKLKRGLWS PEEDEKLVNY ITTYGRHGCW SSVPNLAGLK RGSFFLQEAA 60 LIIELHNMLR NKWAQIASYL PGRTDSAVKN FWNYNTKKKL LQFQLQTVND QARRVDAPLP 120 LVKHDQETEN EVDFPPLLPS FMREYFDPIL DQNWDPNHLI MQTRNENNNI NLITNSQPHI 180 QFIDHNFNSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	6e-41	MYB family protein