PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc022080.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 296aa    MW: 33314.7 Da    PI: 8.2277
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc022080.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.27.7e-181461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg+WT+eEd+llvd++k  G g+W++ ++  g+ R++k+c++rw +yl
  Cse_sc022080.1_g010.1 14 RGPWTQEEDQLLVDYIKNNGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 61
                           89******************************99************97 PP
2Myb_DNA-binding51.52.3e-1667112148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg++++eE++l +++++ lG++ W++Ia+ ++ gRt++++k+ w+++l
  Cse_sc022080.1_g010.1  67 RGPFSPEEEKLVIQLHAILGNR-WAAIAAQIP-GRTDNEIKNLWNTHL 112
                            89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGRAPCCEKT GLKRGPWTQE EDQLLVDYIK NNGHGSWRSL PKLAGLLRCG KSCRLRWTNY  60
LRPDIKRGPF SPEEEKLVIQ LHAILGNRWA AIAAQIPGRT DNEIKNLWNT HLRKRLLSIG  120
IDPQTHEPTS ISSPLMGPLK RLPASPSTRH MAQWESARLE AEARLSLESS LLLAQSTPLT  180
PNKRTNTDYF LRIWHSEVGN SFRNIDINRK KLICSSPASQ ASVSGMTVEM WPKPEPEQSS  240
SNPEPESKPN IKDTHLYAGY THSSSSDEVE DSSDTALQLF FDFPGQNDMS FLEAQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-101MYB family protein