PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc022103.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 224aa    MW: 26133.8 Da    PI: 7.8949
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc022103.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.74.6e-121764148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg+WT +Ed +l   +   G  +W+++++  g+ R++k+c++rw +yl
  Cse_sc022103.1_g070.1 17 RGPWTIDEDHKLMTFILNNGIQCWRLVPKLAGLMRCGKSCRLRWINYL 64
                           89********************************************97 PP
2Myb_DNA-binding54.62.4e-1770113146
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            rg++T+ E++ +++++++lG++ W++Ia+ ++ gRt++++k++w++
  Cse_sc022103.1_g070.1  70 RGAFTEAEEDMIIQLHARLGNR-WSKIAAQFP-GRTDNEIKNHWNT 113
                            89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MIKMGRQPCC EKNGLRRGPW TIDEDHKLMT FILNNGIQCW RLVPKLAGLM RCGKSCRLRW  60
INYLRPDLKR GAFTEAEEDM IIQLHARLGN RWSKIAAQFP GRTDNEIKNH WNTRIKKKMK  120
FLGLDPRTHH PIEQHHNVEP ILKLENGEST SSHNIFNNDK VKEENNDISI DKTPTIEDIG  180
YMMMSNDHQL ATCTTSFELE FPQTWIDSPG FQWDAFNDTG LSFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.16e-80MYB family protein