PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022124.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 371aa MW: 42171.7 Da PI: 6.827

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022124.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.8	2.2e-53	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPtdeel+++yLkkk++ +k+++ +vi+e+d++kvePwdL+++++ ++ewyfFs++d+ky+tg+r+nrat++g+Wka Cse_sc022124.1_g020.1 8 VPPGFRFHPTDEELLHYYLKKKISFQKFDM-DVIREIDLNKVEPWDLQERCNIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKA 94 69**************************.99**********964444222456************************* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 tg+dk + + + e++g++ktLvfy+grap+g+ktdW+mheyrle Cse_sc022124.1_g020.1 95 TGRDKCIRN-TFEKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 137 ****9.8899**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MASSSGGVPP GFRFHPTDEE LLHYYLKKKI SFQKFDMDVI REIDLNKVEP WDLQERCNIG 60 STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNTFEKIGM RKTLVFYRGR 120 APHGQKTDWI MHEYRLEDND DHHDPLNQSL TTPEDGWVIC RVFKKKNLFK VGGSEGSRGS 180 IGSDQLNLGS NQAGSFSQAN HQYLPYHQEQ HQQLQTFVDL GLNHGHLPHQ YPHHQAQNFI 240 PTHKPLGYDF SNLPSEDSPV MVKQLMSNHG ECDSGSCENQ LPVGYQASEP GLEAGTSCEP 300 TQNLVNPTGN EWGMMDRLVN TSHLGAANED GDSSKRVVRY ENNTNASSSS TMQPINQLSL 360 HAEMDLWRYG K

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MASSSGGVPP GFRFHPTDEE LLHYYLKKKI SFQKFDMDVI REIDLNKVEP WDLQERCNIG  60
STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNTFEKIGM RKTLVFYRGR  120
APHGQKTDWI MHEYRLEDND DHHDPLNQSL TTPEDGWVIC RVFKKKNLFK VGGSEGSRGS  180
IGSDQLNLGS NQAGSFSQAN HQYLPYHQEQ HQQLQTFVDL GLNHGHLPHQ YPHHQAQNFI  240
PTHKPLGYDF SNLPSEDSPV MVKQLMSNHG ECDSGSCENQ LPVGYQASEP GLEAGTSCEP  300
TQNLVNPTGN EWGMMDRLVN TSHLGAANED GDSSKRVVRY ENNTNASSSS TMQPINQLSL  360
HAEMDLWRYG K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-127	NAC family protein