PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022134.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TCP

Protein Properties

Length: 437aa MW: 48547.5 Da PI: 6.5109

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022134.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.1	2.3e-36	99	274	2	127
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........................ 65 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai+el+++ Cse_sc022134.1_g020.1 99 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAELppwkptidstpvvnfehnqddeiv 186 79**************************************************************999976654444433332222222 PP TCP 66 ....ssssaseceaesssssasnsssg...........................................kaaksaakskksqksaas 106 + + ++++ +++ ++ + s +s Cse_sc022134.1_g020.1 187 dnqmG---------------------TnqnssflptsldsvksffpmggssaapvdnnmqfhrgftpldmSSRTGSNQVQDLKLSLQS 253 22220.....................11223456666666667777777777777777777777777766333333333333333333 PP TCP 107 alnlakesrakarararertr 127 ++++ ++++++++++ +++++ Cse_sc022134.1_g020.1 254 VQDPIQHHHHQQQENHHQNEQ 274 334444333333333333222 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MELCLFKPFG GLIISYMNNF YHFQHNLQSY HAQQELNVVD QVEKHEYAPS FPGKMEENFN 60 YNSYNQEEKP NRLKRAGLRN PVRGGEIVEV EGGHIVRSTG RKDRHSKVCT AKGPRDRRVR 120 LSAHTAIQFY DVQDRLGYDR PSKAVDWLIK KAKSAIDELA ELPPWKPTID STPVVNFEHN 180 QDDEIVDNQM GTNQNSSFLP TSLDSVKSFF PMGGSSAAPV DNNMQFHRGF TPLDMSSRTG 240 SNQVQDLKLS LQSVQDPIQH HHHQQQENHH QNEQGNNSNG NNNMFFDGSG WPESGGFQRL 300 IAYGGGGGGG SGDGVPNGFV FGSAQTTPFL QPLFGQAGQP TNNQLFNYVS QRGPLQSSNT 360 PQVRAWVDPQ PFSGVGIDQH QGLAFHYPSS MTGFSSSVGG FSGYQLPARI QGDDEEHDGE 420 KFAAFRSMRG AQEVLIS

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MELCLFKPFG GLIISYMNNF YHFQHNLQSY HAQQELNVVD QVEKHEYAPS FPGKMEENFN  60
YNSYNQEEKP NRLKRAGLRN PVRGGEIVEV EGGHIVRSTG RKDRHSKVCT AKGPRDRRVR  120
LSAHTAIQFY DVQDRLGYDR PSKAVDWLIK KAKSAIDELA ELPPWKPTID STPVVNFEHN  180
QDDEIVDNQM GTNQNSSFLP TSLDSVKSFF PMGGSSAAPV DNNMQFHRGF TPLDMSSRTG  240
SNQVQDLKLS LQSVQDPIQH HHHQQQENHH QNEQGNNSNG NNNMFFDGSG WPESGGFQRL  300
IAYGGGGGGG SGDGVPNGFV FGSAQTTPFL QPLFGQAGQP TNNQLFNYVS QRGPLQSSNT  360
PQVRAWVDPQ PFSGVGIDQH QGLAFHYPSS MTGFSSSVGG FSGYQLPARI QGDDEEHDGE  420
KFAAFRSMRG AQEVLIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-58	TCP family protein