PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022263.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 183aa MW: 21362.1 Da PI: 6.9337

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022263.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.2	2.2e-09	38	72	1	34
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkg 34 +g W++eEde+lv++++ +G + +W+++++ g++ Cse_sc022263.1_g010.1 38 KGLWSPEEDEKLVNYITTYGRHgCWSSVPNLAGLK 72 678***************98******99944 PP
2	Myb_DNA-binding	35.3	2.7e-11	73	116	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ +E l+++++++l ++ W+ Ia+++ gRt+ +k++w++ Cse_sc022263.1_g010.1 73 RGSFSLQEAALIIELHNMLRNK-WAQIASYLS-GRTDSAVKNFWNS 116 899*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MSNNVFYIRR YGITRSCFGQ ERCMREETDS AIDKKLTKGL WSPEEDEKLV NYITTYGRHG 60 CWSSVPNLAG LKRGSFSLQE AALIIELHNM LRNKWAQIAS YLSGRTDSAV KNFWNSNTKK 120 KLLQFQLQTV NDQARRVDAP LPLVKHDQET ENEVDFPPLL PSFMREYFDP ILDQNWDPNQ 180 FDH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	9e-39	MYB family protein