PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc022324.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 377aa    MW: 42786.2 Da    PI: 8.4904
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc022324.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.71e-05128151123
                            EEETTTTEEESSHHHHHHHHHH.T CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                            y+Cp+Cg+ F  + +L++H+   H
  Cse_sc022324.1_g020.1 128 YPCPNCGEIFHKPGLLEQHQAFkH 151
                            99******************8877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MTNIRPVFTK FISLIFILIH LGCFIIFPTS DPRRKHSKNT RKPSSPLPLL RPTGGTLKPR  60
KTLKSSWAFI KSIFSSKPSS QFDANSSIIH HVPSPVSSTR SLRNSAPLET RPGSLTDFDF  120
FPLRNDIYPC PNCGEIFHKP GLLEQHQAFK HAVSELFDDE PGKNIVRIIF QTGWPHDIVK  180
NPMIYRVMKI HNSPKILTRF EEYREVVKAK ATRYGRRIDE SGADLHIRHW DERCIADGNE  240
HLRFHCATFL CDLGQNGNSS ICSHQYCSVC GIIRVGFSTK MDGISTFSTS YKGHMALPED  300
IEEEFRFMHV KRAMLVCRVI AGRVGCDPDM ADKDDPGYDS LVGREPCATQ TRVDDEDELI  360
VFNPRAVLPC FVIAYTV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.17e-99C2H2 family protein