PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc022336.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 354aa    MW: 38707.5 Da    PI: 6.0936
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc022336.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.23.5e-16265301135
                   GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C++Cg ++  Tp++Rrgp+g++tLCnaCGl+++ kg+
  Cse_sc022336.1_g030.1 265 CRHCGISSksTPMMRRGPSGPRTLCNACGLKWANKGV 301
                            *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MSEPDMNHNH QIYQAVNLQP INLHHHPHHH PQQPQQQMAN NMVDDVVVQE DDDDDDDDDV  60
AAGEEESIDN PQIRYNNNNH HHHHLNNNNQ QMQAHGHGHG GGGMEEMGVN QHALYVPESE  120
IQPVNSGAGA NGGADQLTLS FQGEVYVFDA VSPEKVQAVL LLLGGYEVPT GAPTLAIPSH  180
NQRALNEFPA RSSQPQRAAS LIRFREKRKE RCFDKKIRYT VRKEVALRMQ RKKGQFTSSK  240
AINDEAGAGA SDWNGGNGQD EETLCRHCGI SSKSTPMMRR GPSGPRTLCN ACGLKWANKG  300
VLRDLNKVSA SGAIDPTGKT IEQTDGEPND NNAVNVNAII VSNAGDTSAV GVER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-86GATA family protein