PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc022349.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 274aa    MW: 31938.9 Da    PI: 8.3028
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc022349.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.85.2e-182168148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg+WT +Ed ll+++v+ +G g+W++ a+  g++Rt+k+c++rw++yl
  Cse_sc022349.1_g030.1 21 RGPWTLDEDNLLIQYVTCHGEGRWNSLAKSSGLKRTGKSCRLRWLNYL 68
                           89********************************************97 PP
2Myb_DNA-binding47.93.2e-1575117246
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            g+ +++E++l+++++ ++G++ W++Ia+ ++ gRt++++k++w++
  Cse_sc022349.1_g030.1  75 GNLSPQEQLLILELHSKWGNR-WSKIAQQLP-GRTDNEIKNYWRT 117
                            6779*****************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MRVSKKISSS CHEQEVGELR RGPWTLDEDN LLIQYVTCHG EGRWNSLAKS SGLKRTGKSC  60
RLRWLNYLKP DVKHGNLSPQ EQLLILELHS KWGNRWSKIA QQLPGRTDNE IKNYWRTKVQ  120
KQARYLKIDS NSKKFVEALK QFWLPRLLEK VEQSSPSSSS TSTTTMDAYQ KNLSHQALSN  180
ETLMENTYSS SSICSLNSTK IVLPYLPESS IQSNGYFVDN NNFDAMSFNH LNMQESRYSD  240
MSTLDFQLAE VDWMNNELVD DTFWNMDELW QFRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.12e-84MYB family protein