PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022455.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 250aa MW: 28351 Da PI: 8.2324

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022455.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	67.3	2.4e-21	104	160	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK + +s+fpr Ct++ gC++ k+v++ ++d +++eitY g+H+++ Cse_sc022455.1_g020.1 104 GDGYSWRKYGQKAILNSKFPR----CTHKhvqGCNALKQVQQLEDDSNMFEITYIGHHTCT 160 5*****************7....6666666*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MEINKKKLVE TLIKGRNSAK RLQTLLHQKV DDDELVSVDG LVNEISESFY HGLLVLTPTS 60 THLGLACNQV CHGKPPAPAI KERRGSYKRR KTIDSRIEVS GTIGDGYSWR KYGQKAILNS 120 KFPRCTHKHV QGCNALKQVQ QLEDDSNMFE ITYIGHHTCT PPNTSSHHRV VIDSKKFKNR 180 HYSQSNPSIS INNRSDAFIK QEDLFYNVSM ANDAQLTPAL VWNEILTDDL ESFKSDQTLS 240 DISFDDVMFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	115	KRRKTIDSRIEVSGTIGDGYSWRKYGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	2e-30	WRKY family protein