PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc022459.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family SBP
Protein Properties Length: 205aa    MW: 23322.1 Da    PI: 8.1434
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc022459.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP50.45.8e-1621534678
                           TSSEEETTT--SS--S-STTTT-------S--- CS
                    SBP 46 CsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
                             rfh++sefDeekrsCrrrL++hn+rrrk+++
  Cse_sc022459.1_g030.1 21 WYRFHSMSEFDEEKRSCRRRLSDHNARRRKPNE 53
                           46****************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MHATNASICL LLIILQFVYC WYRFHSMSEF DEEKRSCRRR LSDHNARRRK PNEEAMQFNP  60
AYSSFYGTES LDVLSHSTGV QLLVPSKGAR AEIFDQGYKD SLSSNVDAVD LRRALSLLSK  120
NLWGSSALDH PMLSSVSTMP HHGTMHAVPH ASPLSSQQYW QANQQSTDPR VHASATKTSN  180
ANNHFQEFQI FKPQYESSFL FHPNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.15e-15SBP family protein