PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022554.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 471aa MW: 52756.8 Da PI: 9.1408

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022554.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	33.3	9.4e-11	200	246	3	48
RWP-RK 3 keisledlskyFslpikdAAkeLgvc.lTvLKriCRqyGIkRWPhRk 48 +++++e ++k+ +pi +AAk+Lgv+ ++LKr CR + + WP k Cse_sc022554.1_g010.1 200 DSLTMEAVKKHVGKPIDEAAKSLGVSrSSTLKRFCRDNDMTSWPLPK 246 689********************94479************765 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MHSIMSGLSS CFAIFLHSIE TNNDYVLEFF LPLHTEDGRY VQNLVQTLKH SIEIATGFEL 60 GDYTEVAGPP MDLSANIEPN NIQTSSYLMD TNPQSTIISS ITTTNTKILE TVSSDLESIV 120 ADVVKTNSTH VVNQLSHTQD VLNNNGDTIP STEIVVHDDV IRDDDNTTSN RDMVMQITSE 180 TIADAGEKSK CKRGRKRKID SLTMEAVKKH VGKPIDEAAK SLGVSRSSTL KRFCRDNDMT 240 SWPLPKHNKK TARTDSKLSQ TSLSKQNLQQ SSNVRFGLFG VAILLVRVKR WSCASKRHGF 300 SGNWWSCGKH GHLSFKSDSI YQVARLMVFL QRWKNKKSTR HAMQKRDHLE STEKTLNKLN 360 VDMKLPDSNL FSASPKQIKS NEASDTRKVT VKATFKDDMI KVQIPISSRL FELQKEVAHR 420 TKLKSAGCRL KYKDEDGDLI LLACDADLQN LLGGYSTSNS TTVRLIIQAD D

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MHSIMSGLSS CFAIFLHSIE TNNDYVLEFF LPLHTEDGRY VQNLVQTLKH SIEIATGFEL  60
GDYTEVAGPP MDLSANIEPN NIQTSSYLMD TNPQSTIISS ITTTNTKILE TVSSDLESIV  120
ADVVKTNSTH VVNQLSHTQD VLNNNGDTIP STEIVVHDDV IRDDDNTTSN RDMVMQITSE  180
TIADAGEKSK CKRGRKRKID SLTMEAVKKH VGKPIDEAAK SLGVSRSSTL KRFCRDNDMT  240
SWPLPKHNKK TARTDSKLSQ TSLSKQNLQQ SSNVRFGLFG VAILLVRVKR WSCASKRHGF  300
SGNWWSCGKH GHLSFKSDSI YQVARLMVFL QRWKNKKSTR HAMQKRDHLE STEKTLNKLN  360
VDMKLPDSNL FSASPKQIKS NEASDTRKVT VKATFKDDMI KVQIPISSRL FELQKEVAHR  420
TKLKSAGCRL KYKDEDGDLI LLACDADLQN LLGGYSTSNS TTVRLIIQAD D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	4e-15	Nin-like family protein