PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc022605.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 256aa    MW: 28582.7 Da    PI: 8.2121
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc022605.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.81.4e-16102147555
                            HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            hn  E+rRR+riN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  Cse_sc022605.1_g020.1 102 HNLSEKRRRSRINEKLKALQTLVPNS-----NKTDKASMLDEAIEYLKQLQ 147
                            9************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MADLYGNDHR SFSSSSSLES EDMSSFLQTF ISNNNNGSSA SNKYGGPLIP SPVPEFHDSD  60
IRFSDLSSFY SPEPNQVQKV SDVLQSSNPT RPSKRTRAAE IHNLSEKRRR SRINEKLKAL  120
QTLVPNSNKT DKASMLDEAI EYLKQLQLKV QTLAMRNGFG LQPVFSQEQE MQRGICYEEG  180
YKFVSPCDGA AGTSSQNQGF SMRREFGMPN HQIGMMMKPN PVFGSELTNE NQYGFNNHST  240
SMKDTNRSFS GKGVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.11e-33bHLH family protein