PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022801.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 260aa MW: 29716.6 Da PI: 6.7802

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022801.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51	4.9e-16	67	160	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 Y++ e+GF vr+ ++++ g +++++f C+keg+++ + k+ ++ +r r+e t+Ckak+ v ++ +k++v+++ Cse_sc022801.1_g010.1 67 YKDCVVEAGFIVRRGHQTND--GGIVINKEFLCNKEGNKKVKVKEfdslkdncdAKAVKRIRSEFSTNCKAKIYVVRS-GEKYRVKSF 151 55556799*****98877..999**************99**998888899999********999.9**** PP FAR1 82 eleHnHela 90 ++eHnH ++ Cse_sc022801.1_g010.1 152 VEEHNHGFF 160 ****986 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MRQNCASNEF VEDEKLSADV NVEENEEVSS PYFFTSTSML IKPVVVKTLV PVEGTLFDSV 60 EEAYKAYKDC VVEAGFIVRR GHQTNDGGIV INKEFLCNKE GNKKVKVKEF DSLKDNCDAK 120 AVKRIRSEFS TNCKAKIYVV RSGEKYRVKS FVEEHNHGFF TAEDRHLQKS HRSMSLAHQY 180 FAIKASNLNI GPCMSFNFIA ELLGGYENVG ATKIDFKNMS RDIYSYIGKY DAQMIIDKFS 240 ILKERDENFT FEFKTNTDGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-11	FAR1 family protein