PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022983.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NF-YB

Protein Properties

Length: 174aa MW: 19230.9 Da PI: 4.2546

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022983.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	42.2	1.9e-13	12	108	6	96
NF-YB 6 rflPianvsrimkkvlPa......nakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvyl 87 ++lP a v r++k+ l + + ++ kd+ e fi ++++ a+d c++ kr+tin++d++ al ++ f +++++l++ l Cse_sc022983.1_g040.1 12 EELPKAVVRRVVKEKLSQlsqdgaDIQVLKDSLSAFSESSRIFIHYLSATANDICKESKRQTINAEDVFKALEEIEFPEFIASLRTSL 99 679********998752211114467899999999*********************************************** PP NF-YB 88 kkyrelege 96 +++++ +++ Cse_sc022983.1_g040.1 100 EEFKQKNTK 108 9987766 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MATAEKVIGE AEELPKAVVR RVVKEKLSQL SQDGADIQVL KDSLSAFSES SRIFIHYLSA 60 TANDICKESK RQTINAEDVF KALEEIEFPE FIASLRTSLE EFKQKNTKRK SDSSKAKEAK 120 KSKTDEPATE NGEANEKGNE DENEVDENRV DENGADENGT DENGADENGV ADTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27470.1	5e-37	NF-YB family protein