PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc022997.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family TCP
Protein Properties Length: 287aa    MW: 32625.5 Da    PI: 8.8309
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc022997.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.91.3e-361192472130
                    TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssaseceaesssssasnss 86 
                            a+kkdrh ki T++g+RdRR+Rls+++a++fF Lqd LGfdk+ kt+eWLl ++k  i+el +    s+s++ +++++s ++s+s   
  Cse_sc022997.1_g020.1 119 ATKKDRHNKINTAQGPRDRRMRLSLDVAKKFFTLQDLLGFDKANKTVEWLLMKSKSNIQELSSFmdfSNSASGNFNDQSLENSSS--- 203
                            89************************************************************99544333332333333333333... PP

                    TCP  87 sgkaaksaakskksqksaasalnlakesrakarararertrekm 130
                            +++++++++  k+ +k +   + lake+r+ ar+rarert ++ 
  Cse_sc022997.1_g020.1 204 KSSHKEKKKAIKEVRKTSYLLRPLAKETREMARKRARERTVQRS 247
                            22223333344445555555799999*************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MYPPRCNNNG NPSITLNSYN NNTDLLKSPR DDFCSTCPSS FQLFSPPYIT LEDGMVLSEL  60
LQQPNLFCDN DGVTDYTNHN TKTVVHQEFS SLQSDMRICS NKDGDDDGLN KPKSESRRAT  120
KKDRHNKINT AQGPRDRRMR LSLDVAKKFF TLQDLLGFDK ANKTVEWLLM KSKSNIQELS  180
SFMDFSNSAS GNFNDQSLEN SSSKSSHKEK KKAIKEVRKT SYLLRPLAKE TREMARKRAR  240
ERTVQRSSKY GCVGGGDDQF LELAPCLDQS MNRGLNYLGS WTTDQPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.17e-26TCP family protein