PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023055.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 229aa    MW: 26149.8 Da    PI: 9.8803
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023055.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.13.2e-08147193553
                            HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                    HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                             ++ E++RR++++s +++L +l+P+++   sk  + ++ + +A+eYI++
  Cse_sc023055.1_g010.1 147 RKITEKNRRNQMKSFYSNLFSLIPPNV--FSKEGDVSDRVDRAIEYIQM 193
                            6899*********************74..8999**************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MKIAFLLSIH LSLLVSIHCY GGNGYDPLKT ALNAQRAKRS TIGHATKSEY TYSPVYEGQQ  60
HGLKDADKIS ALPGQPSETD FDQYSGYVTV DPNHGRALFY YFSESPTNSS TNPLVLWLNG  120
VYKPLLRYQH MEGSIKCSAS DLKKPERKIT EKNRRNQMKS FYSNLFSLIP PNVFSKEGDV  180
SDRVDRAIEY IQMSKTHLDM LKNKKEKLSS RKRSHEHTKM INNVCSRHI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-07bHLH family protein