PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023076.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 321aa    MW: 36289.8 Da    PI: 7.0799
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023076.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.64.5e-1115531048
                           HHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding 10 ellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           ++l+d+++ +G g+W++ ++  g+ R++k+c++rw +yl
  Cse_sc023076.1_g020.1 15 QILIDYIQAHGHGSWSALPKLAGLQRCGKSCRLRWTNYL 53
                           68***********************************97 PP
2Myb_DNA-binding551.9e-1759104148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg++++eE++++++++  lG++ W+tIa +++ gRt++++k++w++++
  Cse_sc023076.1_g020.1  59 RGKFSKEEEDIILHLHSVLGNK-WSTIATRLP-GRTDNEIKNYWNTHM 104
                            89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MMKITSSRKV HGHLQILIDY IQAHGHGSWS ALPKLAGLQR CGKSCRLRWT NYLQPDIKRG  60
KFSKEEEDII LHLHSVLGNK WSTIATRLPG RTDNEIKNYW NTHMKKKLLH MGIDPTTHQP  120
RTDFYSCLPQ LLALANIKEL LEHNQLAQNL QYFNFLLQNN TGLSTLLNRT NSILQMQEET  180
PSFANDFQLA LNQGSEEMTQ FLGLNYSVSQ PLHDEVSIMN LQTTNDHEVV GHEHGKARLT  240
TVNSSSSLSS SVTNWTSMPP LIDSTTPTTT QTLNSGSHES GSAISYGGSE GDRGASSYNW  300
PKYLFEDSFL DRNLQEIKYD L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.15e-73MYB family protein