PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023099.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 276aa    MW: 31018.1 Da    PI: 7.4054
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023099.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.5e-1181132254
                            HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                    HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                            +  hn+ Er RR+r+N+ ++ Lr+llP  a   ++kK s   ++ +A  YI +L
  Cse_sc023099.1_g010.1  81 KLDHNASERDRRKRVNDLYAYLRSLLPIsA--DQKKKISIPRTVSRALIYIPEL 132
                            678*************************65..78888**************888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MQALSPTLFS TTYGWPSENN ITQNHQEDFN DIYMDIEANS YNPLLDILSC DQSQQNCAPG  60
SCSSRGAIDG NTVNPMKVSK KLDHNASERD RRKRVNDLYA YLRSLLPISA DQKKKISIPR  120
TVSRALIYIP ELRKEVETLI RKKETLSSHS LSTTSTSPKN IGIKRQSDKD VKINTNSSVV  180
SSVSILGEKE VVIQLISSTD KMSKNRDIGY LSRVLAYLEA EENGFVLLNS TTFKCSEEEM  240
LLNTLHLQVQ GDNKVEAEIL KEKLCRLSQQ TNELSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-34bHLH family protein