PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023119.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 301aa    MW: 34707 Da    PI: 4.843
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023119.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM180.54.2e-56101361129
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeel+++yL +kv++++++   +i evd++kvePw+Lp ++k +e+ew+fF+ rd+ky+tg+r+nrat++gyWkatgk
  Cse_sc023119.1_g010.1  10 LPPGFRFHPTDEELISYYLYPKVSDTTFTS-LAIGEVDLNKVEPWELPWRAKLGEQEWFFFCVRDRKYPTGSRTNRATEAGYWKATGK 96 
                            79*************************988.67***************888999********************************** PP

                    NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                            dke+++ +++lvg+kktLvfykgrapkgektdWvmheyrle
  Cse_sc023119.1_g010.1  97 DKEIYK-EKSLVGMKKTLVFYKGRAPKGEKTDWVMHEYRLE 136
                            ******.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MENHDEQIDL PPGFRFHPTD EELISYYLYP KVSDTTFTSL AIGEVDLNKV EPWELPWRAK  60
LGEQEWFFFC VRDRKYPTGS RTNRATEAGY WKATGKDKEI YKEKSLVGMK KTLVFYKGRA  120
PKGEKTDWVM HEYRLEGIFA TNNLPKSAKG EWVISRVFHK SAGGKKIPIS GLIRMNNGNY  180
YNDDFESGNM PPLMEMSSGE GGSRTEISHV TCFSESMEEQ KPENDEMVGS WSSSSYPMVP  240
SMENFQYQDT TWMQDPSILK ILHDPISDLN VRQNPKIEMV DNQDYGMNLG GQADFDCLWN  300
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.11e-111NAC family protein