PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023168.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 246aa    MW: 28158.5 Da    PI: 9.9025
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023168.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.16.6e-13136228180
                            EEEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS..........-EEEEEE...EEETTE.EEE-TTHHHH CS
                     B3   1 ffkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesg..........rsWevkl.iyrkksgr.yvltkGWkeF 68 
                            f+k lt+ dv+ks grl +p k +++        +        + le+++g          r+W+++l i++ + ++ yv+++GW++ 
  Cse_sc023168.1_g010.1 136 FEKRLTKTDVTKSqGRLLIPVKQVKKGgfltkyeK-------NILLENKEGlkvqvfdserRTWTLNLgIWCMSCNEnYVFKSGWNKV 216
                            899*******99989*********99976554440.......5555555555555555555*******7776666667********** PP

                            HHHHT--TT-EE CS
                     B3  69 vkangLkegDfv 80 
                            v+angLke+ ++
  Cse_sc023168.1_g010.1 217 VDANGLKENMVI 228
                            *******98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MAKTTERVKE KRCRKGVARF LSVIKFRDDN PKVSEIVFAK LAEIRRHKES ANKKLVIKCG  60
GKIFLKNVET KYSREADSPD NPVSNTIFDG VDHSSDDQSV ENMENKYSSL FKDLIISDGV  120
VDYITSIGGS NLELMFEKRL TKTDVTKSQG RLLIPVKQVK KGGFLTKYEK NILLENKEGL  180
KVQVFDSERR TWTLNLGIWC MSCNENYVFK SGWNKVVDAN GLKENMVIRI WSFRVDERLC  240
FALVGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05930.14e-14B3 family protein