PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023182.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 153aa    MW: 17833.6 Da    PI: 10.1013
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023182.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.49.1e-10243347
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                            WT +Ede+l+++ k+ ++  W+tIa  +g  Rt+ qc++r+  +
  Cse_sc023182.1_g030.1  2 EWTRQEDERLLHLAKLAPSQ-WSTIAPIVG--RTPFQCIERYERL 43
                           6*****************99.********8..**********876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
TEWTRQEDER LLHLAKLAPS QWSTIAPIVG RTPFQCIERY ERLLDVACAK DGTYESGDDP  60
RKLLRGENDP NMESKPARPD PVDMDKDEIE MLSEARARLA NTRGKKAKRK AREKHLEEAR  120
MLASLQKRRE MKVAGIDYMQ RKRKSKEIVM LRL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127144KRREMKVAGIDYMQRKRK
2140145QRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09770.13e-63MYB family protein