PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023239.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 170aa    MW: 18966.6 Da    PI: 10.6572
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023239.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-1856108156
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                            ++++GVr+++ +g+++AeIrdp ++g  +r++lg++ ++e+Aa a+++a+ k++g+
  Cse_sc023239.1_g010.1  56 KKFRGVRRRP-WGKFAAEIRDPAKRG--ARIWLGTYESPEDAAFAYDQAAYKMRGA 108
                            59********.**********97765..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MSGSIQNHLI HDSNISNLFA DTSTTSAVAL DGILDKMTIK EKKVVADGTH MLSKVKKFRG  60
VRRRPWGKFA AEIRDPAKRG ARIWLGTYES PEDAAFAYDQ AAYKMRGARA LLNFPHLIGS  120
NMVEPVRVKP RTRTTEIVSP SSSSEDNRLE RARTSSRHAK MVDDSTHKPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-42ERF family protein