PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023297.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 255aa    MW: 29242.8 Da    PI: 6.7089
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023297.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM150.67.5e-4771461127
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknra......... 77 
                            lp+G+rF+Ptdeel+++yL+ k++g++ e+ ++i+e+d++k ePwdLp  + +++ ++ew+fF+++d+ky++g+r nra         
  Cse_sc023297.1_g010.1   7 LPVGYRFRPTDEELINHYLRLKINGRHDEV-TCIREIDVCKNEPWDLPdlSVIESIDNEWFFFCPKDRKYQNGERLNRAtyqngerln 93 
                            799************************998.89**************96447788899*************99988887688888887 PP

                    NAM  78 ..tksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                              t +gyWkatgkd++++++ +++++g kktLvfy grapkge+t+Wv+hey 
  Cse_sc023297.1_g010.1  94 raTVAGYWKATGKDRTIKTSrGSRVIGKKKTLVFYIGRAPKGERTHWVIHEYC 146
                            7799*************99867888***************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MDVLPVLPVG YRFRPTDEEL INHYLRLKIN GRHDEVTCIR EIDVCKNEPW DLPDLSVIES  60
IDNEWFFFCP KDRKYQNGER LNRATYQNGE RLNRATVAGY WKATGKDRTI KTSRGSRVIG  120
KKKTLVFYIG RAPKGERTHW VIHEYCPTEK ELDGSHPGQS PFVLCRLFKK HDCKDENIGS  180
SNFNDVDQSS AHSPSIVKSS TEDPQPSVNE SCAVASSDKT NVDPLDYLDF PQLDYNYNMK  240
DLPDHLGSKL FSPTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.19e-77NAC family protein