PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023306.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 213aa    MW: 23554.7 Da    PI: 8.8102
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023306.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.31.9e-17142176135
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C++C +  Tp+WR gp+g+ktLCnaCG++y++ +l
  Cse_sc023306.1_g030.1 142 CTHCLSQRTPQWRAGPQGPKTLCNACGVRYKSGRL 176
                            *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MDFCHNISNY PPEQHLLCSL DDILSGHSME QGDVDMEWLS NFVEDCLSSS GNCMSPLVKP  60
QSTTSNAQGT TNTTAQPKPK VKEPNSILQL VVPCKARSKR KRSPTCWLAE TGLIFPKKCT  120
TVYSTSDVQD ESSNGQAQGR KCTHCLSQRT PQWRAGPQGP KTLCNACGVR YKSGRLLPEY  180
RPAKSPTFVT HKHSNSHKKV LEMRSSSTTS FSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.18e-44GATA family protein