PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023399.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 430aa MW: 50415.5 Da PI: 7.8472

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023399.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.8	3.1e-17	58	149	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrnge..itkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 ++Y++YAk++GF+vr +++ sk+n+e + fvC keg++ k ++ + r++++++t+Ck ++vk + + +++++ Hn Cse_sc023399.1_g010.1 58 EYYKAYAKKAGFEVRLGQQYISKKNKEknLDLKYFVCGKEGTNPAPKVGAKPNTRKHPSKHTDCKDVFRVKYIEGRGYWCYEFVEGHN 145 69***************999666551156789******999999********************888889**** PP FAR1 87 Hela 90 H+l+ Cse_sc023399.1_g010.1 146 HNLV 149 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MAQTDTHVFN QDNDYEPVLY SVGIVSKEAG QKLWVPDIPA SEKPAYGMMY HSLEQAYEYY 60 KAYAKKAGFE VRLGQQYISK KNKEKNLDLK YFVCGKEGTN PAPKVGAKPN TRKHPSKHTD 120 CKDVFRVKYI EGRGYWCYEF VEGHNHNLVS EEDTVFLVSS RDFTYTQQVF LYQASQVNLS 180 PVKGFNLLRQ IYGDYEFIGA SSVDCKNYRR DVLDFIGKND AQMLVEMLMS KKDFLPNFSF 240 EYETGENNAL TNLFWADEYA KRNYYAFGDV MSFDATFRTN KYKMVFVPFT GIDNHNHCVT 300 FGAALLSSET KESYIWLLQC FKRAFVRAPK VIVTDQDGSM KVAIDTVFPL SRHRLCMWHI 360 MQKLTSKVGP VLAKDHTFKR RILDIFWTDR IEHEDFEELW ERLLIDFDLK SHKWLSDMYN 420 LRHKWIQAYL

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MAQTDTHVFN QDNDYEPVLY SVGIVSKEAG QKLWVPDIPA SEKPAYGMMY HSLEQAYEYY  60
KAYAKKAGFE VRLGQQYISK KNKEKNLDLK YFVCGKEGTN PAPKVGAKPN TRKHPSKHTD  120
CKDVFRVKYI EGRGYWCYEF VEGHNHNLVS EEDTVFLVSS RDFTYTQQVF LYQASQVNLS  180
PVKGFNLLRQ IYGDYEFIGA SSVDCKNYRR DVLDFIGKND AQMLVEMLMS KKDFLPNFSF  240
EYETGENNAL TNLFWADEYA KRNYYAFGDV MSFDATFRTN KYKMVFVPFT GIDNHNHCVT  300
FGAALLSSET KESYIWLLQC FKRAFVRAPK VIVTDQDGSM KVAIDTVFPL SRHRLCMWHI  360
MQKLTSKVGP VLAKDHTFKR RILDIFWTDR IEHEDFEELW ERLLIDFDLK SHKWLSDMYN  420
LRHKWIQAYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-59	FAR1 family protein