PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023540.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 318aa    MW: 36576.4 Da    PI: 6.3793
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023540.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.22.5e-102669145
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                           rgrWT+eEde l ++++  G g+Wk+ ++  g + +l  ++sr+ 
  Cse_sc023540.1_g010.1 26 RGRWTKEEDETLTKYIQTNGEGSWKLLPKNAG-TVSLHKIVSRLI 69
                           8*******************************.888888888875 PP
2Myb_DNA-binding52.98.3e-1789132146
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            rg+ + eE+e +v+++k +G++ W++Ia++++ gRt++++k++w++
  Cse_sc023540.1_g010.1  89 RGNISVEEHEMIVKLHKAFGNR-WSLIASHLP-GRTDNEIKNYWNS 132
                            78999*****************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MYSNIFATTS VIMGKAPCCE KVGLKRGRWT KEEDETLTKY IQTNGEGSWK LLPKNAGTVS  60
LHKIVSRLIV FVIQIMLRWI NYLRGDLKRG NISVEEHEMI VKLHKAFGNR WSLIASHLPG  120
RTDNEIKNYW NSSLSRQIYR FFTNKNEETQ TSINIANLIN KKKRVGRVSR CVAKKYNKDR  180
VFNKLPFLST TNKPAPQKPV DKQADENVGV GSSFVTENIK ESEACDNVVS DEMKPNLFGF  240
QGNELIDADN FLESEAWDTN GVLSIHDEYQ IEQWLADIDV ENLMNNERNF DETMGYNMSD  300
EGNDMLVWLW EGSYPTQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.13e-60MYB family protein