PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023569.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 311aa MW: 35229 Da PI: 9.0044

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023569.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.2e-18	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++q+G g+W++ +++ g++R++k+c++rw +yl Cse_sc023569.1_g010.1 17 KGPWTPEEDRKLLSYIQQYGHGSWRSLPAKAGLKRCGKSCRLRWTNYL 64 79********************************************97 PP
2	Myb_DNA-binding	53.7	4.9e-17	70	114	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg ++ eE+ +++++++lG++ W+tIa++++ +Rt++++k++w+++ Cse_sc023569.1_g010.1 70 RGTFSFEEERTIIQLHALLGNR-WSTIAAHLP-RRTDNEIKNHWNSH 114 899*****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MRVSACASDG LGIGVKKGPW TPEEDRKLLS YIQQYGHGSW RSLPAKAGLK RCGKSCRLRW 60 TNYLRPDIKR GTFSFEEERT IIQLHALLGN RWSTIAAHLP RRTDNEIKNH WNSHIKKRMT 120 KMGIDPMTHK PKSGTQLLGT NLNHMAQWEA ARLEAEARLV QKPKNHLNQL SHNHVSPQSI 180 LDLHKTSTTL PPQNLPCLDV LKVWQGNLWS NYSINNESLQ SLISRPKVSV ATPVMPVLIN 240 NVESNGTCGQ GPTMKHNDQT ETQTGPFDEF EYANDANFIN DYPLRSPEFC EEFVDVLDGG 300 WNSLINNFAL I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-74	MYB family protein